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For the 2026 school year, there are 3 public schools serving 270 students in Seneca, WI (there are , serving 18 private students). 94% of all K-12 students in Seneca, WI are educated in public schools (compared to the WI state average of 85%).

The top-ranked public schools in Seneca, WI are Seneca Junior High School, Seneca High School and Seneca Elementary School. Overall testing rank is based on a school's combined math and reading proficiency test score ranking.

Seneca, WI public schools have an average math proficiency score of 34% (versus the Wisconsin public school average of 40%), and reading proficiency score of 50% (versus the 38% statewide average). Schools in Seneca have an average ranking of 6/10, which is in the top 50% of Wisconsin public schools.

Minority enrollment is 4% of the student body (majority Hispanic), which is less than the Wisconsin public school average of 34% (majority Hispanic and Black).